check.subjects.files

string. The FreeSurfer SUBJECTS_DIR, i.e., a directory containing the data for all your subjects, each in a subdir named after the subject identifier.

subjects_dir

vector of strings. The subject identifiers.

subjects_list

vector of character strings, the file names, relative to the data dir of the subject.

sfiles

internal

Provides high-level access to neuroimaging data from standard software packages like 'FreeSurfer' <http://freesurfer.net/> on the level of subjects and groups. Load morphometry data, surfaces and brain parcellations based on atlases. Mask data using labels, load data for specific atlas regions only, and visualize data and statistical results directly in 'R'.

Tim Schc3<a4>fer

fsbrain

Managing and Visualizing Brain Surface Data

Tim Schäfer

check.subjects.files function

<dl><dt>subjects_dir</dt>
<dd>string. The FreeSurfer SUBJECTS_DIR, i.e., a directory containing the data for all your subjects, each in a subdir named after the subject identifier.</dd>
<dt>subjects_list</dt>
<dd>vector of strings. The subject identifiers.</dd>
<dt>sfiles</dt>
<dd>vector of character strings, the file names, relative to the data dir of the subject.</dd></dl>

Arguments

Report subjects missing files — check.subjects.files

<dl>

<dt>subjects_dir</dt>
<dd>string. The FreeSurfer SUBJECTS_DIR, i.e., a directory containing the data for all your subjects, each in a subdir named after the subject identifier.</dd>


<dt>subjects_list</dt>
<dd>vector of strings. The subject identifiers.</dd>


<dt>sfiles</dt>
<dd>vector of character strings, the file names, relative to the data dir of the subject.</dd>

</dl>

check.subjects.files: Report subjects missing files

Description

Usage

Value

Arguments