download_fsaverage3

Download some relevant files from the FreeSurfer v6 fsaverage3 subject. The files are subject to the FreeSurfer software license, see parameter 'accept_freesurfer_license' for details. This data is not required for the package to work. If you are working on a machine that has FreeSurfer installed, you already have this data anyways and do not need to download it.

Provides high-level access to neuroimaging data from standard software packages like 'FreeSurfer' <http://freesurfer.net/> on the level of subjects and groups. Load morphometry data, surfaces and brain parcellations based on atlases. Mask data using labels, load data for specific atlas regions only, and visualize data and statistical results directly in 'R'.

Tim Schc3<a4>fer

fsbrain

Managing and Visualizing Brain Surface Data

Tim Schäfer

download_fsaverage3 function

<dl><dt>accept_freesurfer_license</dt>
<dd>logical, whether you accept the FreeSurfer license for fsaverage, available at https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferSoftwareLicense. Defaults to FALSE.</dd>
<dt>scheme</dt>
<dd>character string, the URL scheme to use. Either <code>"https"</code> (the default) or <code>"http"</code>. Switching to <code>"http"</code> can be useful as a fallback if the HTTPS server is unreachable.</dd></dl>

Arguments

Download the FreeSurfer v6 low-resolution fsaverage3 subject. — download_fsaverage3

<dl>

<dt>accept_freesurfer_license</dt>
<dd>logical, whether you accept the FreeSurfer license for fsaverage, available at https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferSoftwareLicense. Defaults to FALSE.</dd>


<dt>scheme</dt>
<dd>character string, the URL scheme to use. Either <code>"https"</code> (the default) or <code>"http"</code>. Switching to <code>"http"</code> can be useful as a fallback if the HTTPS server is unreachable.</dd>

</dl>

download_fsaverage3: Download the FreeSurfer v6 low-resolution fsaverage3 subject.

Description

Usage

Value

Arguments