download_fs_LR_32_atlases

Download a set of cortical atlas files (annotations) defined in the space of the fs_LR 32k template (the HCP-style surface space), based on a declarative manifest file shipped with this package. The atlases (e.g., Schaefer 100-1000, Brainnetome, AAL3) are not part of FreeSurfer and are not subject to the FreeSurfer license. This data is not required for the package to work.

Provides high-level access to neuroimaging data from standard software packages like 'FreeSurfer' <https://freesurfer.net/> on the level of subjects and groups. Load morphometry data, surfaces and brain parcellations based on atlases. Mask data using labels, load data for specific atlas regions only, and visualize data and statistical results directly in 'R'.

Tim Schc3<a4>fer

fsbrain

Managing and Visualizing Brain Surface Data

Tim Schäfer

The General Hospital Corporation (Boston, MA) 

Van Essen Lab 

Alexander Schaefer

Ru Kong

Lingzhong Fan

Edmund T. Rolls

Matthew F. Glasser

Kathryn Mills

download_fs_LR_32_atlases function

<dl><dt>scheme</dt>
<dd>character string, the URL scheme to use. Either <code>"https"</code> (the default) or <code>"http"</code>. Switching to <code>"http"</code> can be useful as a fallback if the HTTPS server is unreachable.</dd></dl>

Arguments

Download atlas files for the fs_LR 32k template. — download_fs_LR_32_atlases

<dl>

<dt>scheme</dt>
<dd>character string, the URL scheme to use. Either <code>"https"</code> (the default) or <code>"http"</code>. Switching to <code>"http"</code> can be useful as a fallback if the HTTPS server is unreachable.</dd>

</dl>

Download atlas files for the fs_LR 32k template.

download_fs_LR_32_atlases: Download atlas files for the fs_LR 32k template.

Description

Usage

Value

Arguments