volume.clusters.colormap

All shells of both signs share one colormap, so that the color of a shell is exactly the color that the colorbar shows for its iso-level. A symmetric range which covers all iso-levels is used unless the user requested a range via the 'range' entry of <code>makecmap_options</code>.

internal

Provides high-level access to neuroimaging data from standard software packages like 'FreeSurfer' <https://freesurfer.net/> on the level of subjects and groups. Load morphometry data, surfaces and brain parcellations based on atlases. Mask data using labels, load data for specific atlas regions only, and visualize data and statistical results directly in 'R'.

Tim Schc3<a4>fer

fsbrain

Managing and Visualizing Brain Surface Data

Tim Schäfer

The General Hospital Corporation (Boston, MA) 

Van Essen Lab 

Alexander Schaefer

Ru Kong

Lingzhong Fan

Edmund T. Rolls

Matthew F. Glasser

Kathryn Mills

volume.clusters.colormap function

<dl><dt>makecmap_options</dt>
<dd>named list, the colormap options, see <code>makecmap</code>.</dd>
<dt>levels</dt>
<dd>numerical vector of iso-levels.</dd>
<dt>max_abs</dt>
<dd>single positive number, the absolute value of the most extreme value that the colormap has to cover, i.e., half of the range of the colormap. Defaults to the highest absolute iso-level.</dd></dl>

Arguments

Compute the shared colormap of the cluster shells. — volume.clusters.colormap

<dl>

<dt>makecmap_options</dt>
<dd>named list, the colormap options, see <code>makecmap</code>.</dd>


<dt>levels</dt>
<dd>numerical vector of iso-levels.</dd>


<dt>max_abs</dt>
<dd>single positive number, the absolute value of the most extreme value that the colormap has to cover, i.e., half of the range of the colormap. Defaults to the highest absolute iso-level.</dd>

</dl>

Compute the shared colormap of the cluster shells.

volume.clusters.colormap: Compute the shared colormap of the cluster shells.

Description

Usage

Value

Arguments