fulltext (version 0.1.6)

bmc_search: Search for gene sequences available for a species from NCBI.

Description

Search for gene sequences available for a species from NCBI.

Usage

bmc_search(terms, limit = 10, page = 1, ...)

Arguments

terms

Search terms.

limit

Number of records to return. Max 25. Default 10.

page

Page number. Only applies if more than 25 results.

...

Further args passed on to GET

Value

A list.

Examples

## Not run: 
# bmc_search(terms = 'ecology')
# bmc_search(terms = 'fire', limit=3)
# bmc_search(terms = 'fire', limit=2, page=1)
# bmc_search(terms = 'fire', limit=2, page=2)
# 
# (out <- bmc_search(terms = 'fire', limit=5))
# 
# # Search, then get full text
# out <- bmc_search(terms = 'ecology')
# out$urls # you could use these to go to the website
# out$ids # used to construct download urls in bmc_xml
# browseURL(out$urls[1])
# 
# # curl debugging help
# library('httr')
# bmc_search(terms = 'ecology', config=verbose())
# ## End(Not run)