Learn R Programming

⚠️There's a newer version (0.8-17) of this package.Take me there.

gMCP (version 0.8-15)

Graph Based Multiple Comparison Procedures

Description

Functions and a graphical user interface for graphical described multiple test procedures.

Copy Link

Version

Install

install.packages('gMCP')

Monthly Downloads

1,130

Version

0.8-15

License

GPL (>= 2)

Maintainer

Kornelius Rohmeyer

Last Published

March 23rd, 2020

Functions in gMCP (0.8-15)

calcPower

Calculate power values
bonferroni.trimmed.simes.test

Trimmed Simes test for intersections of two hypotheses and otherwise weighted Bonferroni-test
bdiagNA

Create a Block Diagonal Matrix with NA outside the diagonal
entangledMCP-class

Class entangledMCP
simConfint

Simultaneous confidence intervals for sequentially rejective multiple test procedures
bonferroni.test

Weighted Bonferroni-test
exampleGraphs

Functions that create different example graphs
corMatWizard

Graphical User Interface for the creation of correlation matrices
doInterim

EXPERIMENTAL: Evaluate conditional errors at interim for a pre-planned graphical procedure
gPADInterim-class

Class gPADInterim
graphMCP-class

Class graphMCP
generateTest

generateTest
graphTest

Multiple testing using graphs
plotSimCI

Plot confidence intervals
gMCPResult-class

Class gMCPResult
gMCP.extended

Graph based Multiple Comparison Procedures
weighted.test.functions

Weighted Test Functions for use with gMCP
getJavaInfo

Get Memory and Runtime Info from JVM
gMCP

Graph based Multiple Comparison Procedures
extractPower

Calculate power values
gMCP-package

Graphical described Multiple Comparison Procedures
sampSize

Sample size calculations
placeNodes

Placement of graph nodes
generateBounds

generateBounds
gMCPReport

Automatic Generation of gMCP Reports
parametric.test

Weighted parametric test
generateWeights

generateWeights
matrix2graph

Matrix2Graph and Graph2Matrix
generatePvals

generatePvals
simes.test

Weighted Simes test
simes.on.subsets.test

Simes on subsets, otherwise Bonferroni
hydroquinone

Hydroquinone Mutagenicity Assay
rqmvnorm

Random sample from the multivariate normal distribution
graphGUI

Graphical User Interface for graphical described multiple comparison procedures
joinGraphs

Joins two graphMCP objects
graph2latex

Graph2LaTeX
sampSizeCore

Function for sample size calculation
unitTestsGMCP

Run the R unit (and optional the JUnit) test suite for gMCP
rejectNode

Rejects a node/hypothesis and updates the graph accordingly.
substituteEps

Substitute Epsilon
replaceVariables

Replaces variables in a general graph with specified numeric values
graphAnalysis

Analysis of a gMCP-Graph
subgraph

Get a subgraph
secondStageTest

EXPERIMENTAL: Construct a valid level alpha test for the second stage of an adaptive design that is based on a pre-planned graphical MCP
simvastatin

Simvastatin and Colesevelam Treatment in Patients with Primary Hypercholesterolemia