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gMCP (version 0.8-15)
Graph Based Multiple Comparison Procedures
Description
Functions and a graphical user interface for graphical described multiple test procedures.
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Install
install.packages('gMCP')
Monthly Downloads
1,130
Version
0.8-15
License
GPL (>= 2)
Maintainer
Kornelius Rohmeyer
Last Published
March 23rd, 2020
Functions in gMCP (0.8-15)
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calcPower
Calculate power values
bonferroni.trimmed.simes.test
Trimmed Simes test for intersections of two hypotheses and otherwise weighted Bonferroni-test
bdiagNA
Create a Block Diagonal Matrix with NA outside the diagonal
entangledMCP-class
Class entangledMCP
simConfint
Simultaneous confidence intervals for sequentially rejective multiple test procedures
bonferroni.test
Weighted Bonferroni-test
exampleGraphs
Functions that create different example graphs
corMatWizard
Graphical User Interface for the creation of correlation matrices
doInterim
EXPERIMENTAL: Evaluate conditional errors at interim for a pre-planned graphical procedure
gPADInterim-class
Class gPADInterim
graphMCP-class
Class graphMCP
generateTest
generateTest
graphTest
Multiple testing using graphs
plotSimCI
Plot confidence intervals
gMCPResult-class
Class gMCPResult
gMCP.extended
Graph based Multiple Comparison Procedures
weighted.test.functions
Weighted Test Functions for use with gMCP
getJavaInfo
Get Memory and Runtime Info from JVM
gMCP
Graph based Multiple Comparison Procedures
extractPower
Calculate power values
gMCP-package
Graphical described Multiple Comparison Procedures
sampSize
Sample size calculations
placeNodes
Placement of graph nodes
generateBounds
generateBounds
gMCPReport
Automatic Generation of gMCP Reports
parametric.test
Weighted parametric test
generateWeights
generateWeights
matrix2graph
Matrix2Graph and Graph2Matrix
generatePvals
generatePvals
simes.test
Weighted Simes test
simes.on.subsets.test
Simes on subsets, otherwise Bonferroni
hydroquinone
Hydroquinone Mutagenicity Assay
rqmvnorm
Random sample from the multivariate normal distribution
graphGUI
Graphical User Interface for graphical described multiple comparison procedures
joinGraphs
Joins two graphMCP objects
graph2latex
Graph2LaTeX
sampSizeCore
Function for sample size calculation
unitTestsGMCP
Run the R unit (and optional the JUnit) test suite for gMCP
rejectNode
Rejects a node/hypothesis and updates the graph accordingly.
substituteEps
Substitute Epsilon
replaceVariables
Replaces variables in a general graph with specified numeric values
graphAnalysis
Analysis of a gMCP-Graph
subgraph
Get a subgraph
secondStageTest
EXPERIMENTAL: Construct a valid level alpha test for the second stage of an adaptive design that is based on a pre-planned graphical MCP
simvastatin
Simvastatin and Colesevelam Treatment in Patients with Primary Hypercholesterolemia