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gPCA (version 1.0)

Batch Effect Detection via Guided Principal Components Analysis

Description

This package implements guided principal components analysis for the detection of batch effects in high-throughput data.

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Version

Install

install.packages('gPCA')

Monthly Downloads

3

Version

1.0

License

GPL (>= 2)

Maintainer

Sarah Reese

Last Published

July 31st, 2013

Functions in gPCA (1.0)

gPCA.batchdetect

Guided Principal Components Analysis
PCplot

Principal Component Plot
caseDat

Case study copy number variation data
gPCA-package

Batch Effect Detection via Guided Principal Components Analysis
gDist

Density/Distribution Plot for gPCA
CumulativeVarPlot

Plot of the Cumulative Variance due to the Principal Components