Compiles a Bayesian network. This means creating a junction tree and establishing clique potentials.
# S3 method for grain
compile(
  object,
  propagate = FALSE,
  tug = NULL,
  root = NULL,
  control = object$control,
  details = 0,
  ...
)A compiled Bayesian network; an object of class
grain.
A grain object.
If TRUE the network is also propagated meaning that the cliques of the junction tree are calibrated to each other.
A triangulated undirected graph.
A set of variables which must be in the root of the junction tree
Controlling the compilation process.
For debugging info. Do not use.
Currently not used.
Søren Højsgaard, sorenh@math.aau.dk
Søren Højsgaard (2012). Graphical Independence Networks with the gRain Package for R. Journal of Statistical Software, 46(10), 1-26. https://www.jstatsoft.org/v46/i10/.
grain, propagate,
propagate.grain,
triangulate, rip,
junctionTree