getFrequencies.BigBang

BigBang.getFrequencies

getFrequencies,BigBang-method

getFrequencies

<p>The <code>BigBang</code> object can save information about solutions that did not reach the <code>goalFitness</code>. <code>filter=="solutions"</code> ensures that only chromosomes that reach the <code>goalFitness</code> are considered. <code>fitlter=="none"</code> take all chromosomes. <code>filter=="nosolutions"</code> consider only no-solutions (for comparative purposes).</p>

filter

<p>Second level of filter. <code>subset</code> can be a vector specifying which filtered chromosomes are used. It can be a logical vector or a numeric vector (indexes in order given by <code>$bestChromosomes</code> in <code>BigBang</code> object variable).</p>

subset

methods

internal

Build multivariate predictive models from large datasets
having far larger number of features than samples such as in
functional genomics datasets.
Trevino and Falciani (2006) <doi:10.1093/bioinformatics/btl074>.

getFrequencies.BigBang: Computes gene freqencies

Description

Usage

Arguments

Value

References

See Also