gamlss.countKinf (version 3.5.1)

KINBII: K-inflated Negative Binomial type II distributions for fitting a GAMLSS model

Description

The function KINBII defines the K-inflated Negative Binomial type II distribution, a three parameter distribution, for a gamlss.family object to be used in GAMLSS fitting using the function gamlss(). The functions dKINBII, pKINBII, qKINBII and rKINBII define the density, distribution function, quantile function and random generation for the K-inflated Negative Binomial type II, KINBII(), distribution.

Usage

KINBII(mu.link = "log", sigma.link = "log", nu.link = "logit", kinf="K")
dKINBII(x, mu = 1, sigma = 1, nu = 0.3, kinf=0 ,log = FALSE)
pKINBII(q, mu = 1, sigma = 1, nu = 0.3, kinf=0, lower.tail = TRUE,
    log.p = FALSE)
qKINBII(p, mu = 1, sigma = 1, nu = 0.3, kinf=0, lower.tail = TRUE,
    log.p = FALSE)
rKINBII(n, mu = 1, sigma = 1, nu = 0.3, kinf=0)

Arguments

mu.link

Defines the mu.link, with "log" link as the default for the mu parameter

sigma.link

Defines the sigma.link, with "log" link as the default for the sigma parameter

nu.link

Defines the nu.link, with "logit" link as the default for the nu parameter

x

vector of (non-negative integer) quantiles

mu

vector of positive means

sigma

vector of positive despersion parameter

nu

vector of inflated point probability

p

vector of probabilities

q

vector of quantiles

n

number of random values to return

kinf

defines inflated point in generating K-inflated distribution

log,log.p

logical; if TRUE, probabilities p are given as log(p)

lower.tail

logical; if TRUE (default), probabilities are P[X <= x], otherwise, P[X > x]

Value

The functions KINBII return a gamlss.family object which can be used to fit K-inflated Negative Binomial type II distribution in the gamlss() function.

Details

The definition for the K-inflated Negative Binomial type II distribution.

References

Rigby, R. A. and Stasinopoulos D. M. (2005). Generalized additive models for location, scale and shape,(with discussion),Appl. Statist.,54, part 3, pp 507-554.

Stasinopoulos D. M., Rigby R.A. and Akantziliotou C. (2006) Instructions on how to use the GAMLSS package in R. Accompanying documentation in the current GAMLSS help files, (see also http://www.gamlss.org/).

Stasinopoulos D. M. Rigby R.A. (2007) Generalized additive models for location scale and shape (GAMLSS) in R.Journal of Statistical Software, Vol. 23, Issue 7, Dec 2007, http://www.jstatsoft.org/v23/i07.

Rigby, R. A. and Stasinopoulos D. M. (2010) The gamlss.family distributions, (distributed with this package or seehttp://www.gamlss.org/)

Stasinopoulos D. M., Rigby R.A., Heller G., Voudouris V., and De Bastiani F., (2017)Flexible Regression and Smoothing: Using GAMLSS in R, Chapman and Hall/CRC.

Najafabadi, A. T. P. and MohammadPour, S. (2017). A k-Inflated Negative Binomial Mixture Regression Model: Application to Rate-Making Systems. Asia-Pacific Journal of Risk and Insurance, 12.

See Also

gamlss.family, KINBII

Examples

# NOT RUN {
#--------------------------------------------------------------------------------

# gives default links for the  Negative Binomial distribution  type II
KINBII()
#--------------------------------------------------------------------------------

# generate zero inflated Negative Binomial type II distribution
gen.Kinf(family=NBII, kinf=0)

# generate random sample from zero inflated Negative Binomial type II distribution
x<-rinf0NBII(1000, mu=1, sigma=.5, nu=.2)

# fit the zero inflated Negative Binomial type II distribution using gamlss
data<-data.frame(x=x)
# }
# NOT RUN {
gamlss(x~1, family=inf0NBII, data=data)
histDist(x, family=inf0NBII)
# }
# NOT RUN {
#--------------------------------------------------------------------------------

# generated one inflated Negative Binomial  type II distribution
gen.Kinf(family=NBII, kinf=1)

# generate random sample from one inflated Negative Binomial type II distribution
x<-rinf1NBII(1000,mu=1, sigma=.5, nu=.2)

# fit the one inflated Negative Binomial type II distribution using gamlss
data<-data.frame(x=x)
# }
# NOT RUN {
gamlss(x~1, family=inf1NBII, data=data)
histDist(x, family=inf1NBII)
# }
# NOT RUN {
#--------------------------------------------------------------------------------

mu=4; sigma=.5; nu=.2; tau=.2;
par(mgp=c(2,1,0),mar=c(4,4,4,1)+0.1)

#plot the pdf using plot
plot(function(x) dinf1NBII(x, mu=mu, sigma=sigma, nu=nu), from=0, to=20, n=20+1,
     type="h",xlab="x",ylab="f(x)",cex.lab=1.5)
#--------------------------------------------------------------------------------

#plot the cdf using plot
cdf <- stepfun(0:19, c(0,pinf1NBII(0:19, mu=mu, sigma=sigma, nu=nu)), f = 0)
plot(cdf, xlab="x", ylab="F(x)", verticals=FALSE, cex.points=.8, pch=16, main="",cex.lab=1.5)
#--------------------------------------------------------------------------------

#plot the qdf using plot
invcdf <- stepfun(seq(0.01,.99,length=19), qinf1NBII(seq(0.1,.99,length=20),mu,       sigma), f = 0)
plot(invcdf, ylab=expression(x[p]==F^{-1}(p)), do.points=FALSE,verticals=TRUE,
     cex.points=.8, pch=16, main="",cex.lab=1.5, xlab="p")
#--------------------------------------------------------------------------------

# generate random sample
Ni <- rinf1NBII(1000, mu=mu, sigma=sigma, nu=nu)
 hist(Ni,breaks=seq(min(Ni)-0.5,max(Ni)+0.5,by=1),col="lightgray", main="",cex.lab=2)
barplot(table(Ni))
#--------------------------------------------------------------------------------
# }