gause_1934_book_f10

A dataset containing the abundance of Saccharomyces cerevisiae cultivated 
in monoculture with a medium change in different time periods under anaerobic conditions.
The Number of Individuals is measured in Number of cells per 1/250 mm3.

datasets

A collection of tools and data for analyzing the Gause microcosm experiments, and for fitting Lotka-Volterra models to time series data. Includes methods for fitting single-species logistic growth, and multi-species interaction models, e.g. of competition, predator/prey relationships, or mutualism. See documentation for individual functions for examples. In general, see the lv_optim() function for examples of how to fit parameter values in multi-species systems. Note that the general methods applied here, as well as the form of the differential equations that we use, are described in detail in the Quantitative Ecology textbook by Lehman et al., available at <http://hdl.handle.net/11299/204551>, and in Lina K. Mühlbauer, Maximilienne Schulze, W. Stanley Harpole, and Adam T. Clark. 'gauseR': Simple methods for fitting Lotka-Volterra models describing Gause's 'Struggle for Existence' in the journal Ecology and Evolution.

Adam Clark

gauseR

Lotka-Volterra Models for Gause's 'Struggle for Existence'

Lina Mühlbauer

Maximilienne Schulze

gause_1934_book_f10 function

A data frame with 29 rows and 6 variables:<dl>
 <dt>Paper</dt>
<dd>Paper from which data are drawn</dd> <dt>Figure</dt>
<dd>Figure number in paper</dd> <dt>Species</dt>
<dd>Name of Species: Saccharomyces cerevisiae</dd> <dt>Time</dt>
<dd>Hour of experiment</dd> <dt>Individuals</dt>
<dd>Number of cells per 1/250 mm3</dd> <dt>Treatment</dt>
<dd>Treatments: medium change every 3, 12, 24 hours and control</dd>
</dl>

Format

Growth of Saccharomyces cerevisiae with medium change — gause_1934_book_f10

A data frame with 29 rows and 6 variables:<dl>
 <dt>Paper</dt>
<dd>Paper from which data are drawn</dd>

 <dt>Figure</dt>
<dd>Figure number in paper</dd>

 <dt>Species</dt>
<dd>Name of Species: Saccharomyces cerevisiae</dd>

 <dt>Time</dt>
<dd>Hour of experiment</dd>

 <dt>Individuals</dt>
<dd>Number of cells per 1/250 mm3</dd>

 <dt>Treatment</dt>
<dd>Treatments: medium change every 3, 12, 24 hours and control</dd>


</dl>

gause_1934_book_f10: Growth of Saccharomyces cerevisiae with medium change

Description

Usage

Arguments

Format