gc_smooth.spline

This function is a wrapper for <a href="/link/smooth.spline?package=gcplyr&version=1.11.0" data-mini-rdoc="gcplyr::smooth.spline">smooth.spline</a>, which fits 
a cubic smoothing spline to the supplied data, but includes the option
to remove <code>NA</code> values, and returns values in the original order.

Easy wrangling and model-free analysis of
microbial growth curve data, as commonly output by plate readers.
Tools for reshaping common plate reader outputs into 'tidy' formats and
merging them with design information, making data easy to work with using
'gcplyr' and other packages. Also streamlines common growth curve
processing steps, like smoothing and calculating derivatives, and
facilitates model-free characterization and analysis of growth data.
See methods at <https://mikeblazanin.github.io/gcplyr/>.

Mike Blazanin

gcplyr

Wrangle and Analyze Growth Curve Data

gc_smooth.spline function

<dl><dt>x</dt>
<dd>A vector giving the values of the predictor variable.</dd>
<dt>y</dt>
<dd>A vector giving the values of the response variable. If <code>y</code> is
missing or <code>NULL</code>, the responses are assumed to be specified
by <code>x</code>, with <code>x</code> the index vector.</dd>
<dt>...</dt>
<dd>Additional arguments passed to <a href="/link/smooth.spline?package=gcplyr&version=1.11.0" data-mini-rdoc="gcplyr::smooth.spline">smooth.spline</a>.</dd>
<dt>na.rm</dt>
<dd>logical whether NA's should be removed before analyzing.
Required to be TRUE if any <code>x</code> or <code>y</code> values are NA.</dd></dl>

Arguments

This function is a wrapper for <a href='https://rdrr.io/r/stats/smooth.spline.html'>smooth.spline</a>, which fits 
a cubic smoothing spline to the supplied data, but includes the option
to remove <code>NA</code> values, and returns values in the original order.

Fit a Smoothing Spline — gc_smooth.spline

<dl>

<dt>x</dt>
<dd>A vector giving the values of the predictor variable.</dd>


<dt>y</dt>
<dd>A vector giving the values of the response variable. If <code>y</code> is
missing or <code>NULL</code>, the responses are assumed to be specified
by <code>x</code>, with <code>x</code> the index vector.</dd>


<dt>...</dt>
<dd>Additional arguments passed to <a href='https://rdrr.io/r/stats/smooth.spline.html'>smooth.spline</a>.</dd>


<dt>na.rm</dt>
<dd>logical whether NA's should be removed before analyzing.
Required to be TRUE if any <code>x</code> or <code>y</code> values are NA.</dd>

</dl>

gc_smooth.spline: Fit a Smoothing Spline

Description

Usage

Value

Arguments

Details