makemethod_train_smooth_data

This function generates a list which is compatible to be used as the
<code>method</code> argument to <a href="/link/train?package=gcplyr&version=1.11.0" data-mini-rdoc="gcplyr::train">train</a>. This enables users to
call <a href="/link/train?package=gcplyr&version=1.11.0" data-mini-rdoc="gcplyr::train">train</a> directly themselves with <code>smooth_data</code>
smoothing functions.

Easy wrangling and model-free analysis of
microbial growth curve data, as commonly output by plate readers.
Tools for reshaping common plate reader outputs into 'tidy' formats and
merging them with design information, making data easy to work with using
'gcplyr' and other packages. Also streamlines common growth curve
processing steps, like smoothing and calculating derivatives, and
facilitates model-free characterization and analysis of growth data.
See methods at <https://mikeblazanin.github.io/gcplyr/>.

Mike Blazanin

gcplyr

Wrangle and Analyze Growth Curve Data

makemethod_train_smooth_data function

<dl><dt>sm_method</dt>
<dd>Argument specifying which smoothing method should
be used. Options include "moving-average", "moving-median", 
"loess", "gam", and "smooth.spline".</dd>
<dt>tuneGrid</dt>
<dd>A data frame with possible tuning value. The columns should 
be named the same as the tuning parameters.
Note that, when using <a href="/link/train?package=gcplyr&version=1.11.0" data-mini-rdoc="gcplyr::train">train</a>, the tuneGrid
must be passed both to this function as well as directly
to <a href="/link/train?package=gcplyr&version=1.11.0" data-mini-rdoc="gcplyr::train">train</a>.</dd></dl>

Arguments

This function generates a list which is compatible to be used as the
<code>method</code> argument to <a href='https://rdrr.io/pkg/caret/man/train.html'>train</a>. This enables users to
call <a href='https://rdrr.io/pkg/caret/man/train.html'>train</a> directly themselves with <code>smooth_data</code>
smoothing functions.

Create method argument for train of growth curve smoothers — makemethod_train_smooth_data

<dl>

<dt>sm_method</dt>
<dd>Argument specifying which smoothing method should
be used. Options include "moving-average", "moving-median", 
"loess", "gam", and "smooth.spline".</dd>


<dt>tuneGrid</dt>
<dd>A data frame with possible tuning value. The columns should 
be named the same as the tuning parameters.
Note that, when using <a href='https://rdrr.io/pkg/caret/man/train.html'>train</a>, the tuneGrid
must be passed both to this function as well as directly
to <a href='https://rdrr.io/pkg/caret/man/train.html'>train</a>.</dd>

</dl>

makemethod_train_smooth_data: Create method argument for train of growth curve smoothers

Description

Usage

Value

Arguments