plot_eic

<code>plot_eic</code> Plots the EICs

Provides complete detailed preprocessing of two-dimensional gas chromatogram (GCxGC) samples. Baseline correction, smoothing, peak detection, and peak alignment. Also provided are some analysis functions, such as finding extracted ion chromatograms, finding mass spectral data, targeted analysis, and nontargeted analysis with either the 'National Institute of Standards and Technology Mass Spectral Library' or with the mass data. There are also several visualization methods provided for each step of the preprocessing and analysis.

Stephanie Gamble

gcxgclab

GCxGC Preprocessing and Analysis

Mannion Joseph

Granger Caroline

Battelle Savannah River Alliance 

NNSA, US DOE 

plot_eic function

<dl><dt>eic</dt>
<dd>a data.frame object. A data frame of the times and
intensity values of the EIC of interest, ideally the output of find_eic().</dd>
<dt>title</dt>
<dd>a string object. Title placed at the top of the plot.
Default title "EIC".</dd>
<dt>dim</dt>
<dd>a integer object. The time dimensions of the plot, either 1
or 2. Default is 1.</dd></dl>

Arguments

Plots the EICs — plot_eic

<dl>

<dt>eic</dt>
<dd>a data.frame object. A data frame of the times and
intensity values of the EIC of interest, ideally the output of find_eic().</dd>


<dt>title</dt>
<dd>a string object. Title placed at the top of the plot.
Default title "EIC".</dd>


<dt>dim</dt>
<dd>a integer object. The time dimensions of the plot, either 1
or 2. Default is 1.</dd>

</dl>

plot_eic: Plots the EICs

Description

Usage

Value

Arguments

Details

References

Examples