TIC_integrate

<code>TIC_integrate</code> calculates the total area under the TIC curve.

Provides complete detailed preprocessing of two-dimensional gas chromatogram (GCxGC) samples. Baseline correction, smoothing, peak detection, and peak alignment. Also provided are some analysis functions, such as finding extracted ion chromatograms, finding mass spectral data, targeted analysis, and nontargeted analysis with either the 'National Institute of Standards and Technology Mass Spectral Library' or with the mass data. There are also several visualization methods provided for each step of the preprocessing and analysis.

Stephanie Gamble

gcxgclab

GCxGC Preprocessing and Analysis

Mannion Joseph

Granger Caroline

Battelle Savannah River Alliance 

NNSA, US DOE 

TIC_integrate function

<dl><dt>data</dt>
<dd>a list object. Data extracted from a cdf file,
ideally the output from extract_data().</dd>
<dt>start_t</dt>
<dd>a float or string object. Value of starting time
for integration range. Default is 'first' which will start at the initial
time in the data.</dd>
<dt>end_t</dt>
<dd>a float or string object. Value of ending time for
integration range. Default is 'last' which will start at the final time in
the data.</dd></dl>

Arguments

TIC integration — TIC_integrate

<dl>

<dt>data</dt>
<dd>a list object. Data extracted from a cdf file,
ideally the output from extract_data().</dd>


<dt>start_t</dt>
<dd>a float or string object. Value of starting time
for integration range. Default is 'first' which will start at the initial
time in the data.</dd>


<dt>end_t</dt>
<dd>a float or string object. Value of ending time for
integration range. Default is 'last' which will start at the final time in
the data.</dd>

</dl>

TIC_integrate: TIC integration

Description

Usage

Value

Arguments

Details

Examples