.revComp_EqLength

Converts a vector of equally long character strings into its reverse complement.

Provides the necessary functions to identify and extract a selection of already available barcode constructs (Cornils, K. et al. (2014) <doi:10.1093/nar/gku081>) and freely choosable barcode designs from next generation sequence (NGS) data. Furthermore, it offers the possibility to account for sequence errors, the calculation of barcode similarities and provides a variety of visualisation tools (Thielecke, L. et al. (2017) <doi:10.1038/srep43249>).

Lars Thielecke

genBaRcode

Analysis and Visualization Tools for Genetic Barcode Data

.revComp_EqLength function

<dl><dt>seq_dat</dt>
<dd>a character vector.</dd>
<dt>word_length</dt>
<dd>an integer giving the word length.</dd></dl>

Arguments

DNA string manipulation for equal string sizes — .revComp_EqLength

<dl>

<dt>seq_dat</dt>
<dd>a character vector.</dd>


<dt>word_length</dt>
<dd>an integer giving the word length.</dd>

</dl>

.revComp_EqLength: DNA string manipulation for equal string sizes

Description

Usage

Arguments