generateTimeSeriesData

Generates a matrix containing barcodes sequences as rows and consecutive measurements at columns. It serves as
the necessary data object for the plotting function `plotTimeSeries`.

Provides the necessary functions to identify and extract a selection of already available barcode constructs (Cornils, K. et al. (2014) <doi:10.1093/nar/gku081>) and freely choosable barcode designs from next generation sequence (NGS) data. Furthermore, it offers the possibility to account for sequence errors, the calculation of barcode similarities and provides a variety of visualisation tools (Thielecke, L. et al. (2017) <doi:10.1038/srep43249>).

Lars Thielecke

genBaRcode

Analysis and Visualization Tools for Genetic Barcode Data

generateTimeSeriesData function

<dl><dt>BC_dat_list</dt>
<dd>a list of BCdat objects.</dd></dl>

Arguments

Generating Time Series Data Object — generateTimeSeriesData

<dl>

<dt>BC_dat_list</dt>
<dd>a list of BCdat objects.</dd>

</dl>

generateTimeSeriesData: Generating Time Series Data Object

Description

Usage

Value

Arguments