getBackboneSelection

allows the user to choose between predefined backbone sequences. Excecution of the function without any parameter
value will display all available backbone sequences. The id parameter will accept the name of the backbone or the
rownumber of the shown selection.

Provides the necessary functions to identify and extract a selection of already available barcode constructs (Cornils, K. et al. (2014) <doi:10.1093/nar/gku081>) and freely choosable barcode designs from next generation sequence (NGS) data. Furthermore, it offers the possibility to account for sequence errors, the calculation of barcode similarities and provides a variety of visualisation tools (Thielecke, L. et al. (2017) <doi:10.1038/srep43249>).

Lars Thielecke

genBaRcode

Analysis and Visualization Tools for Genetic Barcode Data

getBackboneSelection function

<dl><dt>id</dt>
<dd>an integer or character value in order to choose a specific backbone.</dd></dl>

Arguments

Predefined Barcode Backbone Sequences — getBackboneSelection

<dl>

<dt>id</dt>
<dd>an integer or character value in order to choose a specific backbone.</dd>

</dl>

getBackboneSelection: Predefined Barcode Backbone Sequences

Description

Usage

Value

Arguments

Examples