get_spp

<p>A string vector with the sequence description (title and species).</p>

description

<p>Parse a string vector with sequence descriptions (title and species) and
extract the species name.</p>

A pipeline with high specificity and sensitivity in extracting
proteins from the RefSeq database (National Center for Biotechnology
Information). Manual identification of gene families is highly
time-consuming and laborious, requiring an iterative process of manual and
computational analysis to identify members of a given family. The pipelines
implements an automatic approach for the identification of gene families
based on the conserved domains that specifically define that family. See
Die et al. (2018) <doi:10.1101/436659> for more information and examples.

Jose V. Die

geneHummus

A Pipeline to Define Gene Families in Legumes and Beyond

Moamen M. Elmassry

Kimberly H. LeBlanc

Olaitan I. Awe

Allissa Dillman

Ben Busby

get_spp function

Get the species name from the description sequence — get_spp

Get the species name from the description sequence

get_spp: Get the species name from the description sequence

Description

Usage

Arguments

Value