genoset

genoset-package


Load, manipulate, and plot copynumber and BAF data. GenoSet class
extends eSet by adding a "locData" slot for a GenomicRanges object.
This object contains feature genome location data and
provides for efficient subsetting on genome location.
Genoset also implements an number of  convenience functions for processing of copy number and B-Allele Frequency data and for working with segmented data.


Load, manipulate, and plot copynumber and BAF data.
GenoSet class extends eSet by adding a "locData" slot for a
GRanges object. This object contains feature
genome location data and provides for efficient subsetting on
genome location.
Provides convenience functions for processing of copy number and
B-Allele Frequency data. Provides the class RleDataFrame to
store runs of data along the genome for multiple samples.

genoset-package: GenoSet: An eSet for data with genome locations

Description

Arguments

See Also