genoset (version 1.28.2)

chrNames: Get list of unique chromosome names

Description

Get list of unique chromosome names

Usage

chrNames(object)
## S3 method for class 'GenoSet':
chrNames(object)
## S3 method for class 'GenomicRanges':
chrNames(object)
chrNames(object) <- value
## S3 method for class 'GenoSet':
chrNames(object) <- value
## S3 method for class 'GenomicRanges':
chrNames(object) <- value

Arguments

object

GenomicRanges or GenoSet

value

return value of chrNames

Value

• character vector with names of chromosomes

Examples

data(genoset,package="genoset")
  chrNames(genoset.ds) # c("chr1","chr3","chrX")
  chrNames(rowRanges(genoset.ds))  # The same
  chrNames(genoset.ds) = sub("^chr","",chrNames(genoset.ds))