pmx_plot_cats

At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling
activities in order to reduce the overall effort required for generating such plots.
For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox,
called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient
for publication and submissions using few lines of code. This package focuses on plots recommended by ISoP
<doi:10.1002/psp4.12161>. While not required, you can get/install the 'R' 'lixoftConnectors'
package in the 'Monolix' installation, as described at the following url
<https://monolix.lixoft.com/monolix-api/lixoftconnectors_installation/>.
When 'lixoftConnectors' is available, 'R' can use 'Monolix' directly to create the required
Chart Data instead of exporting it from the 'Monolix' gui.

Matthew Fidler

ggPMX

'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models

pmx_plot_cats function

<dl><dt>ctr</dt>
<dd><code>pmxClass</code> pmx controller</dd>
<dt>pname</dt>
<dd>plot name</dd>
<dt>cats</dt>
<dd>list of categorical variables. By default all of them</dd>
<dt>chunk</dt>
<dd>chunk name</dd>
<dt>print</dt>
<dd><code>logical</code> if TRUE print plots otherwise the list of plots is returned</dd>
<dt>...</dt>
<dd>others graphics parameters passed :<ul>
<li><code>pmx_gpar</code> internal function to customize shared graphical parameters</li>
<li><code>pmx_qq</code> quantile-quantile plot object</li>
<li><code>pmx_update</code> function.</li>
</ul></dd></dl>

Arguments

Generic pmx stratified plot — pmx_plot_cats

<dl>

<dt>ctr</dt>
<dd><code>pmxClass</code> pmx controller</dd>


<dt>pname</dt>
<dd>plot name</dd>


<dt>cats</dt>
<dd>list of categorical variables. By default all of them</dd>


<dt>chunk</dt>
<dd>chunk name</dd>


<dt>print</dt>
<dd><code>logical</code> if TRUE print plots otherwise the list of plots is returned</dd>


<dt>...</dt>
<dd>others graphics parameters passed :<ul>
<li><code>pmx_gpar</code> internal function to customize shared graphical parameters</li>
<li><code>pmx_qq</code> quantile-quantile plot object</li>
<li><code>pmx_update</code> function.</li>
</ul></dd>

</dl>

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pmx_plot_cats: Generic pmx stratified plot

Description

Usage

Arguments