pmx_plot_saem_convergence

This plot displays the sequence of estimates for population parameters
computed after each iteration of the SAEM algorithm. The purpose is to check
the convergence of the algorithm. In addition, a convergence indicator gives
the estimation for -2 x log-likelihood along the iterations.

At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling
activities in order to reduce the overall effort required for generating such plots.
For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox,
called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient
for publication and submissions using few lines of code. This package focuses on plots recommended by ISoP
<doi:10.1002/psp4.12161>. While not required, you can get/install the 'R' 'lixoftConnectors'
package in the 'Monolix' installation, as described at the following url
<https://monolixsuite.slp-software.com/r-functions/2024R1/installation-and-initialization>.
When 'lixoftConnectors' is available, 'R' can use 'Monolix' directly to create the required
Chart Data instead of exporting it from the 'Monolix' gui.

Aleksandr Pogodaev

ggPMX

'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models

pmx_plot_saem_convergence function

<dl><dt>ctr</dt>
<dd><code>pmxClass</code> controller.</dd>
<dt>...</dt>
<dd>additional parameters (not used).</dd></dl>

Arguments

SAEM Convergence Plot — pmx_plot_saem_convergence

<dl>

<dt>ctr</dt>
<dd><code>pmxClass</code> controller.</dd>


<dt>...</dt>
<dd>additional parameters (not used).</dd>

</dl>

pmx_plot_saem_convergence: SAEM Convergence Plot

Description

Usage

Value

Arguments