pmx_vpc_bin

At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling
activities in order to reduce the overall effort required for generating such plots.
For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox,
called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient
for publication and submissions using few lines of code. This package focuses on plots recommended by ISoP
<doi:10.1002/psp4.12161>. While not required, you can get/install the 'R' 'lixoftConnectors'
package in the 'Monolix' installation, as described at the following url
<https://monolixsuite.slp-software.com/r-functions/2024R1/installation-and-initialization>.
When 'lixoftConnectors' is available, 'R' can use 'Monolix' directly to create the required
Chart Data instead of exporting it from the 'Monolix' gui.

Aleksandr Pogodaev

ggPMX

'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models

pmx_vpc_bin function

<dl><dt>style</dt>
<dd><code>character</code> style chosen on of the: 
"fixed", "sd", "equal", "pretty", "quantile", "kmeans", "hclust" or "jenks"</dd>
<dt>within_strat</dt>
<dd><code>logical</code> if TRUE compute the bining for each strat level. 
By default t is false and bining are equal for all stratifications levels.</dd>
<dt>seed</dt>
<dd><code>integer</code> used in <code>set.seed</code> call to ensure 
reproducibility if style is "kmeans". Set to NULL if this 
is not desired.</dd>
<dt>...</dt>
<dd>other classInt::classIntervals parameters excpet <code>style</code> and <code>n</code></dd></dl>

Arguments

Creates vpc bins — pmx_vpc_bin

<dl>

<dt>style</dt>
<dd><code>character</code> style chosen on of the: 
"fixed", "sd", "equal", "pretty", "quantile", "kmeans", "hclust" or "jenks"</dd>


<dt>within_strat</dt>
<dd><code>logical</code> if TRUE compute the bining for each strat level. 
By default t is false and bining are equal for all stratifications levels.</dd>


<dt>seed</dt>
<dd><code>integer</code> used in <code>set.seed</code> call to ensure 
reproducibility if style is "kmeans". Set to NULL if this 
is not desired.</dd>


<dt>...</dt>
<dd>other classInt::classIntervals parameters excpet <code>style</code> and <code>n</code></dd>

</dl>

pmx_vpc_bin: Creates vpc bins

Description

Usage

Value

Arguments

Details

See Also