pmx_vpc_obs

At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling
activities in order to reduce the overall effort required for generating such plots.
For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox,
called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient
for publication and submissions using few lines of code. This package focuses on plots recommended by ISoP
<doi:10.1002/psp4.12161>. While not required, you can get/install the 'R' 'lixoftConnectors'
package in the 'Monolix' installation, as described at the following url
<https://monolixsuite.slp-software.com/r-functions/2024R1/installation-and-initialization>.
When 'lixoftConnectors' is available, 'R' can use 'Monolix' directly to create the required
Chart Data instead of exporting it from the 'Monolix' gui.

Aleksandr Pogodaev

ggPMX

'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models

pmx_vpc_obs function

<dl><dt>show</dt>
<dd><code>logical</code> if TRUE show observation points</dd>
<dt>color</dt>
<dd><code>character</code> Color of the observed endpoint values. Default: "#000000".</dd>
<dt>size</dt>
<dd><code>numeric</code> Size of the observed endpoint values. Default: 1.</dd>
<dt>alpha</dt>
<dd><code>numeric</code> Transparency of the observed endpoint values. Default: 0.7.</dd>
<dt>shape</dt>
<dd><code>numeric</code> Shape of the observed endpoint values. Default: 1.</dd></dl>

Arguments

Sets vpc observation layer — pmx_vpc_obs

<dl>

<dt>show</dt>
<dd><code>logical</code> if TRUE show observation points</dd>


<dt>color</dt>
<dd><code>character</code> Color of the observed endpoint values. Default: "#000000".</dd>


<dt>size</dt>
<dd><code>numeric</code> Size of the observed endpoint values. Default: 1.</dd>


<dt>alpha</dt>
<dd><code>numeric</code> Transparency of the observed endpoint values. Default: 0.7.</dd>


<dt>shape</dt>
<dd><code>numeric</code> Shape of the observed endpoint values. Default: 1.</dd>

</dl>

pmx_vpc_obs: Sets vpc observation layer

Description

Usage

Value

Arguments

See Also