ggVennDiagram (version 1.5.0)

upset-plot: Plot a upset plot

Description

This function generate a upset plot by creating a composite plot which contains subplots generated by ggplot2.

Usage

plot_upset(
  venn,
  nintersects = NULL,
  order.intersect.by = c("size", "name", "none"),
  order.set.by = c("size", "name", "none"),
  relative_height = 3,
  relative_width = 0.3,
  ...
)

Value

an upset plot

Arguments

venn

a class Venn object

nintersects

number of intersects. If NULL, all intersections will show.

order.intersect.by

'size', 'name', or "none"

order.set.by

'size', 'name', or "none"

relative_height

the relative height of top panel in upset plot

relative_width

the relative width of left panel in upset plot

...

useless

Examples

 list = list(A = sample(LETTERS, 20),
             B = sample(LETTERS, 22),
             C = sample(LETTERS, 14),
             D = sample(LETTERS, 30, replace = TRUE))
 venn = Venn(list)
 plot_upset(venn)
 plot_upset(venn, order.intersect.by = "name")
 plot_upset(venn, nintersects = 6)