ggalign (version 1.1.0)

ggfree: Add ggplot to layout without alignment

Description

The ggfree() function allows you to incorporate a ggplot object into your layout. Unlike ggalign(), which aligns every axis value precisely, ggfree() focuses on integrating plots into the layout without enforcing strict axis alignment.

Usage

ggfree(data = waiver(), ..., size = NULL, active = NULL)
# S3 method for default
ggfree(data = waiver(), mapping = aes(), ..., size = NULL, active = NULL)

Arguments

data

The following options can be used:

• NULL: No data is set.

• waiver(): Inherits the data from the layout matrix.

• A function (including purrr-like lambda syntax): Applied to the layout matrix to transform the data before use. To transform the final plot data, please use scheme_data().

• A matrix, data.frame, or atomic vector.

...

<dyn-dots> Additional arguments passed to fortify_data_frame().

size

The relative size of the plot, can be specified as a unit(). Note that for circle_layout(), all size values will be interpreted as relative sizes, as this layout type adjusts based on the available space in the circular arrangement.

active

A active() object that defines the context settings when added to a layout.

mapping

Default list of aesthetic mappings to use for plot. If not specified, must be supplied in each layer added to the plot.

ggplot2 specification

ggalign initializes a ggplot object. The underlying data is created using fortify_data_frame(). Please refer to this method for more details.

When used in quad_layout()/ggheatmap(), if the data is inherited from the quad_layout() and the other direction aligns discrete variables, following columns will be added:

• .extra_panel: Provides the panel information for the column (left or right annotation) or row (top or bottom annotation).

• .extra_index: The index information for the column (left or right annotation) or row (top or bottom annotation).

Examples

ggheatmap(matrix(rnorm(56), nrow = 7)) +
    anno_top() +
    align_dendro() +
    ggfree(mtcars, aes(wt, mpg)) +
    geom_point()