process_axis_orientation

Standardizes axis label orientation parameters in various formats (character/numeric/vector) into a named vector (mapped by sequence ID)

internal

A function built on 'ggplot2' that visualizes pairwise 'BLAST' alignment results as chord diagrams, intuitively displaying homologous regions between query and subject sequences.

Jem Dang

ggchord

Multi-Sequence 'BLAST' Alignment Chord Diagram Visualization
Tool

process_axis_orientation function

<dl><dt>param</dt>
<dd>Character ("horizontal"), numeric (angle), vector (length matches number of sequences), or named vector, label orientation parameter</dd>
<dt>seqs</dt>
<dd>Character vector, list of sequence IDs</dd></dl>

Arguments

Process axis label orientation parameters — process_axis_orientation

<dl>

<dt>param</dt>
<dd>Character ("horizontal"), numeric (angle), vector (length matches number of sequences), or named vector, label orientation parameter</dd>


<dt>seqs</dt>
<dd>Character vector, list of sequence IDs</dd>

</dl>

process_axis_orientation: Process axis label orientation parameters

Description

Usage

Value

Arguments