theme_base

The goal of 'ggcoverage' is to simplify the process of visualizing genome coverage. It contains functions to
load data from BAM, BigWig or BedGraph files, create genome coverage plot, add various annotations to
the coverage plot, including base and amino acid annotation, GC annotation, gene annotation, transcript annotation, ideogram annotation and peak annotation.

Yabing Song

ggcoverage

Visualize Genome Coverage with Various Annotations

theme_base function

<dl><dt>margin.len</dt>
<dd>Top and bottom margin.</dd>
<dt>fill.color</dt>
<dd>Fill color.</dd></dl>

Arguments

Theme for geom_base. — theme_base

<dl>

<dt>margin.len</dt>
<dd>Top and bottom margin.</dd>


<dt>fill.color</dt>
<dd>Fill color.</dd>

</dl>

theme_base: Theme for geom_base.

Description

Usage

Value

Arguments