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ggdendro (version 0.1-20)

Create Dendrograms and Tree Diagrams Using 'ggplot2'

Description

This is a set of tools for dendrograms and tree plots using 'ggplot2'. The 'ggplot2' philosophy is to clearly separate data from the presentation. Unfortunately the plot method for dendrograms plots directly to a plot device without exposing the data. The 'ggdendro' package resolves this by making available functions that extract the dendrogram plot data. The package provides implementations for tree, rpart, as well as diana and agnes cluster diagrams.

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Install

install.packages('ggdendro')

Monthly Downloads

12,042

Version

0.1-20

License

GPL-2 | GPL-3

Issues

2

Pull Requests

2

Stars

86

Forks

11

Maintainer

Andrie Vries

Last Published

April 27th, 2016

Functions in ggdendro (0.1-20)

ggdendrogram

Creates dendrogram plot using ggplot.
rpart_labels

Extract labels data frame from rpart object for plotting using ggplot.
rpartco

Compute the x-y coordinates for a tree.
as.dendro

Coerces object to class dendro.
dendro_data.tree

Extract data from regression tree object for plotting using ggplot.
ggdendro-package

Create Dendrograms and Tree Diagrams using 'ggplot2'
rpart_segments

Extract data frame from rpart object for plotting using ggplot.
segment

Returns segment, label or leaf-label data from dendro object.
is.dendro

Tests whether an object is of class dendro.
dendro_data.rpart

Extract data from classification tree object for plotting using ggplot.
get_data_tree_leaf_labels

Extract labels data frame from tree object for plotting using ggplot.
tree_segments

Extract data frame from tree object for plotting using ggplot.
treeco

Function copied from tree:::treeco.
dendrogram_data

Extract data frame from dendrogram object for plotting using ggplot.
labels.rpart

Make the nice labels used by print and summary.
tree_labels

Extract labels data frame from tree object for plotting using ggplot.
dendro_data

Extract cluster data from a model into a list of data frames.
theme_dendro

Creates completely blank theme in ggplot.