ggdmc (version 0.2.6.2)

effectiveSize_hyper: Calculate effective sample sizes

Description

effectiveSize calls effectiveSize in coda package to calculate sample sizes.

Usage

effectiveSize_hyper(x, start, end, digits, verbose)
effectiveSize_many(x, start, end, verbose)
effectiveSize_one(x, start, end, digits, verbose)
effectiveSize(
  x,
  hyper = FALSE,
  start = 1,
  end = NA,
  digits = 0,
  verbose = FALSE
)

Arguments

x

posterior samples

start

starting iteration

end

ending iteraton

digits

printing how many digits

verbose

printing more information

hyper

a Boolean switch to extract hyper attribute

Examples

#################################40
## effectiveSize example
#################################40
if (FALSE) {
es1 <- effectiveSize_one(hsam[[1]], 1, 100, 2, TRUE)
es2 <- effectiveSize_one(hsam[[1]], 1, 100, 2, FALSE)
es3 <- effectiveSize_many(hsam, 1, 100, TRUE)
es4 <- effectiveSize_many(hsam, 1, 100, FALSE)
es5 <- effectiveSize_hyper(hsam, 1, 100, 2, TRUE)
es6 <- effectiveSize(hsam, TRUE, 1, 100, 2, TRUE)
es7 <- effectiveSize(hsam, TRUE, 1, 100, 2, FALSE)
es8 <- effectiveSize(hsam, FALSE, 1, 100, 2, TRUE)
es9 <- effectiveSize(hsam, FALSE, 1, 100, 2, FALSE)
es10 <- effectiveSize(hsam[[1]], FALSE, 1, 100, 2, TRUE)
}