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ggmRSCU (version 0.1.0)

Visualizing Multi-Species Relative Synonymous Codon Usage and Extensible Data Exploration

Description

Facilitates efficient visualization of Relative Synonymous Codon Usage patterns across species. Based on analytical outputs from 'codonW', 'MEGA', and 'Phylosuite', it supports multi-species 'RSCU' comparisons and allows users to explore visual analysis of structurally similar datasets.

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Version

Install

install.packages('ggmRSCU')

Monthly Downloads

206

Version

0.1.0

License

GPL (>= 3)

Maintainer

Xunhuan Ding

Last Published

June 24th, 2025

Functions in ggmRSCU (0.1.0)

read_phy

Process PhyloSuite RSCU Data for Visualization
genomic_data

Hominid Genomic Architecture Dataset
energy_data

Energy Production Projection Data
read_codonw

Process .blk files from CodonW
ggmRSCU

Visualization of RSCU (Relative Synonymous Codon Usage) with ggplot2
read_mega

Process MEGA CSV Files
ggmRSCU-package

ggmRSCU: Visualizing Multi-Species Relative Synonymous Codon Usage and Extensible Data Exploration
hydrogen_data

Hydrogen production by technology and scenario (2010–2070)
scoring_data

Cell Scoring Data
rscu_data

Relative Synonymous Codon Usage (RSCU) Data
financial_data

Monthly financial data (income and expenses breakdown)