readSSfile

file

<p>file type. one of "Helix, "Connect", "Vienna" and "Bpseq"</p>

type

Supports visualizing multiple sequence alignment of DNA and protein sequences using 'ggplot2'. It supports a number of colour schemes, including Chemistry, Clustal, Shapely, Taylor and Zappo. Multiple sequence alignment can easily be combined with other 'ggplot2' plots, such as aligning a phylogenetic tree produced by 'ggtree' with multiple sequence alignment.

Guangchuang Yu

ggmsa

Plot Multiple Sequence Alignment using 'ggplot2'

Lang Zhou

Shuangbin Xu

Huina Huang

readSSfile function

readSSfile — readSSfile

readSSfile: readSSfile

Description

Usage

Arguments

Value