kinship2_alignped3

This is an internal helper function for pedigree alignment. It takes two
previously aligned pedigree structures (x1 and x2) and merges them side-by-side,
handling overlapping subjects and adjusting positions appropriately.

internal

Provides plotting functions for visualizing pedigrees and family trees. The package complements a behavior genetics package 'BGmisc' [Garrison et al. (2024) <doi:10.21105/joss.06203>] by rendering pedigrees using the 'ggplot2' framework. Features include support for duplicated individuals, complex mating structures, integration with simulated pedigrees, and layout customization. Due to the impending deprecation of kinship2, version 1.0 incorporates the layout helper functions from kinship2. The pedigree alignment algorithms are adapted from 'kinship2' [Sinnwell et al. (2014) <doi:10.1159/000363105>]. We gratefully acknowledge the original authors: Jason Sinnwell, Terry Therneau, Daniel Schaid, and Elizabeth Atkinson for their foundational work.

S. Mason Garrison

ggpedigree

Visualizing Pedigrees with 'ggplot2' and 'plotly'

kinship2_alignped3 function

<dl><dt>x1</dt>
<dd>First aligned pedigree structure (list)</dd>
<dt>x2</dt>
<dd>Second aligned pedigree structure (list)</dd>
<dt>packed</dt>
<dd>Logical, if TRUE uses compact packing; if FALSE adds spacing</dd>
<dt>space</dt>
<dd>Numeric, horizontal spacing between structures when packed=FALSE (default 1)</dd></dl>

Arguments

Merge two aligned pedigree structures — kinship2_alignped3

<dl>

<dt>x1</dt>
<dd>First aligned pedigree structure (list)</dd>


<dt>x2</dt>
<dd>Second aligned pedigree structure (list)</dd>


<dt>packed</dt>
<dd>Logical, if TRUE uses compact packing; if FALSE adds spacing</dd>


<dt>space</dt>
<dd>Numeric, horizontal spacing between structures when packed=FALSE (default 1)</dd>

</dl>

kinship2_alignped3: Merge two aligned pedigree structures

Description

Usage

Value

Arguments