write.nhx

tree

file


  Writes the phylo object to disk in NHX format.


ggphylo is a set of functions for producing expressive
visualizations of phylogenetic data using ggplot. Its main features
include plotting a tree alongside its alignment and using tree
annotations to modulate visual elements of the plot (e.g. line width,
node size). Various convenience methods are also included for working
more easily with ape's phylo objects.

write.nhx: Writes the phylo object to disk in NHX format.

Description

Usage

Arguments