smart_color_selection

Intelligently selects colors based on data characteristics

Provides a convenient way to analyze and visualize 'PICRUSt2' output with pre-defined plots and functions. Allows for generating statistical plots about microbiome functional predictions and offers customization options. Features a one-click option for creating publication-level plots, saving time and effort in producing professional-grade figures. Streamlines the 'PICRUSt2' analysis and visualization process. For more details, see Yang et al. (2023) <doi:10.1093/bioinformatics/btad470>.

Chen Yang

ggpicrust2

Make 'PICRUSt2' Output Analysis and Visualization Easier

Liangliang Zhang

smart_color_selection function

<dl><dt>n_groups</dt>
<dd>Number of groups in the data</dd>
<dt>has_pathway_class</dt>
<dd>Whether pathway class information is available</dd>
<dt>data_type</dt>
<dd>Type of data ("abundance", "pvalue", "foldchange")</dd>
<dt>accessibility_mode</dt>
<dd>Whether to use accessibility-friendly colors</dd></dl>

Arguments

Smart Color Selection — smart_color_selection

<dl>

<dt>n_groups</dt>
<dd>Number of groups in the data</dd>


<dt>has_pathway_class</dt>
<dd>Whether pathway class information is available</dd>


<dt>data_type</dt>
<dd>Type of data ("abundance", "pvalue", "foldchange")</dd>


<dt>accessibility_mode</dt>
<dd>Whether to use accessibility-friendly colors</dd>

</dl>

smart_color_selection: Smart Color Selection

Description

Usage

Value

Arguments