ggpmisc (version 0.5.5)

xy_outcomes2factor: Convert two numeric ternary outcomes into a factor

Description

Convert two numeric ternary outcomes into a factor

Usage

xy_outcomes2factor(x, y)
xy_thresholds2factor(x, y, x_threshold = 0, y_threshold = 0)

Arguments

x, y

numeric vectors of -1, 0, and +1 values, indicating down regulation, uncertain response or up-regulation, or numeric vectors that can be converted into such values using a pair of thresholds.

x_threshold, y_threshold

numeric vector Ranges enclosing the values to be considered uncertain for each of the two vectors..

Details

This function converts the numerically encoded values into a factor with the four levels "xy", "x", "y" and "none". The factor created can be used for faceting or can be mapped to aesthetics.

See Also

Other Functions for quadrant and volcano plots: FC_format(), outcome2factor(), scale_colour_outcome(), scale_shape_outcome(), scale_y_Pvalue()

Other scales for omics data: outcome2factor(), scale_colour_logFC(), scale_shape_outcome(), scale_x_logFC()

Examples

xy_outcomes2factor(c(-1, 0, 0, 1, -1), c(0, 1, 0, 1, -1))
xy_thresholds2factor(c(-1, 0, 0, 1, -1), c(0, 1, 0, 1, -1))
xy_thresholds2factor(c(-1, 0, 0, 0.1, -5), c(0, 2, 0, 1, -1))