ggsci (version 4.0.0)

scale_color_igv: Integrative Genomics Viewer (IGV) color scales

Description

See pal_igv() for details.

Usage

scale_color_igv(palette = c("default", "alternating"), alpha = 1, ...)
scale_colour_igv(palette = c("default", "alternating"), alpha = 1, ...)
scale_fill_igv(palette = c("default", "alternating"), alpha = 1, ...)

Arguments

palette

Palette type. There are two available options:

• "default" (51-color palette).

• "alternating" (2-color palette).

alpha

Transparency level, a real number in (0, 1]. See alpha in grDevices::rgb() for details.

...

Additional parameters for ggplot2::discrete_scale().

Author

Nan Xiao | | https://nanx.me

Examples

p1 <- example_scatterplot()
p2 <- example_barplot()

p1 + scale_color_igv()
p2 + scale_fill_igv()

p1 + ggplot2::scale_colour_manual(
  values = rep(pal_igv("alternating")(2), times = 3)
)
p2 + ggplot2::scale_fill_manual(
  values = rep(pal_igv("alternating")(2), times = 3)
)