ggstatsplot (version 0.0.6)

grouped_gghistostats: Grouped histograms for distribution of a numeric variable

Description

Helper function for ggstatsplot::gghistostats to apply this function across multiple levels of a given factor and combining the resulting plots using ggstatsplot::combine_plots.

Usage

grouped_gghistostats(data, x, grouping.var, title.prefix = "Group",
  binwidth = NULL, bar.measure = "count", xlab = NULL,
  title = NULL, subtitle = NULL, caption = NULL,
  type = "parametric", test.value = 0, bf.prior = 0.707,
  bf.message = FALSE, robust.estimator = "onestep", nboot = 500,
  k = 3, ggtheme = ggplot2::theme_bw(), ggstatsplot.layer = TRUE,
  fill.gradient = FALSE, low.color = "#0072B2",
  high.color = "#D55E00", bar.fill = "grey50",
  results.subtitle = TRUE, centrality.para = "mean",
  centrality.color = "blue", centrality.size = 1,
  centrality.linetype = "dashed", centrality.line.labeller = TRUE,
  centrality.k = 2, test.value.line = FALSE,
  test.value.color = "black", test.value.size = 1,
  test.value.linetype = "dashed", test.line.labeller = TRUE,
  test.k = 0, messages = TRUE, ...)

Arguments

data

Dataframe from which variables specified are preferentially to be taken. This argument is optional.

x

A numeric variable.

grouping.var

Grouping variable.

title.prefix

Character specifying the prefix text for the fixed plot title (name of each factor level) (Default: "Group").

binwidth

The width of the histogram bins. Can be specified as a numeric value, or a function that calculates width from x. The default is to use the max(x) - min(x) / sqrt(N). You should always check this value and explore multiple widths to find the best to illustrate the stories in your data.

bar.measure

Character describing what value needs to be represented as height in the bar chart. This can either be "count", which shows number of points in bin, or "density", which density of points in bin, scaled to integrate to 1, or "proportion", which shows relative frequencies of observations in each bin, or "mix", which shows both count and proportion in the same plot (only available from ggplot2 3.0.1 onward).

xlab

Label for x axis variable.

title

The text for the plot title.

subtitle

The text for the plot subtitle if you don't want results from one sample test to be displayed (i.e. results.subtitle should be set to FALSE).

caption

The text for the plot caption.

type

Type of statistic expected ("parametric" or "nonparametric" or "robust" or "bayes"). Abbreviations accepted are "p" or "np" or "r" or "bf", respectively.

test.value

A number specifying the value of the null hypothesis (Default: 0).

bf.prior

A number between 0.5 and 2 (default 0.707), the prior width to use in calculating Bayes factors.

bf.message

Logical. Decides whether to display Bayes Factor in favor of null hypothesis for parametric test (Default: bf.message = FALSE). This will work only if results.subtitle = TRUE.

robust.estimator

If test = "robust" robust estimator to be used ("onestep" (Default), "mom", or "median"). For more, see ?WRS2::onesampb.

nboot

Number of bootstrap samples for robust one-sample location test (Default: 100).

k

Number of digits after decimal point (should be an integer) (Default: k = 3).

ggtheme

A function, ggplot2 theme name. Default value is ggplot2::theme_bw(). Any of the ggplot2 themes, or themes from extension packages are allowed (e.g., ggthemes::theme_economist(), hrbrthemes::theme_ipsum_ps(), ggthemes::theme_fivethirtyeight(), etc.).

ggstatsplot.layer

Logical that decides whether theme_ggstatsplot theme elements are to be displayed along with the selected ggtheme (Default: TRUE).

fill.gradient

Logical decides whether color fill gradient is to be displayed (Default: FALSE). If FALSE, the legend and the color gradient will also be removed. The default is set to FALSE because the gradient provides redundant information in light of y-axis labels.

low.color

Colors for low and high ends of the gradient. Defaults are colorblind-friendly.

high.color

Colors for low and high ends of the gradient. Defaults are colorblind-friendly.

bar.fill

If fill.gradient = FALSE, then bar.fill decides which color will uniformly fill all the bars in the histogram (Default: "grey50").

results.subtitle

Decides whether the results of statistical tests are to be displayed as subtitle (Default: results.subtitle = TRUE). If set to FALSE, no statistical tests will be run.

centrality.para

Decides which measure of central tendency ("mean" or "median") is to be displayed as a vertical line.

centrality.color

Decides color for the vertical line for centrality parameter (Default: "blue").

centrality.size

Decides size for the vertical line for centrality parameter (Default: 1.2).

centrality.linetype

Decides linetype for the vertical line for centrality parameter (Default: "dashed").

centrality.line.labeller

A logical that decides whether line labels should be displayed (Default: TRUE).

centrality.k

Integer denoting the number of decimal places expected for test and centrality parameters. (Default: 0 and 2, respectively).

test.value.line

Decides whether test value is to be displayed as a vertical line (Default: FALSE).

test.value.color

Decides color for the vertical line denoting test value (Default: "black").

test.value.size

Decides size for the vertical line for test value (Default: 1.2).

test.value.linetype

Decides linetype for the vertical line for test value (Default: "dashed").

test.line.labeller

A logical that decides whether line labels should be displayed (Default: TRUE).

test.k

Integer denoting the number of decimal places expected for test and centrality parameters. (Default: 0 and 2, respectively).

messages

Decides whether messages references, notes, and warnings are to be displayed (Default: TRUE).

...

Arguments passed on to combine_plots

title.text

String or plotmath expression to be drawn as title for the combined plot.

title.color

Text color for title.

title.size

Point size of title text.

title.vjust

Vertical justification for title. Default = 0.5 (centered on y). 0 = baseline at y, 1 = ascender at y.

title.hjust

Horizontal justification for title. Default = 0.5 (centered on x). 0 = flush-left at x, 1 = flush-right.

title.fontface

The font face ("plain", "bold" (default), "italic", "bold.italic") for title.

caption.text

String or plotmath expression to be drawn as the caption for the combined plot.

caption.color

Text color for caption.

caption.size

Point size of title text.

caption.vjust

Vertical justification for caption. Default = 0.5 (centered on y). 0 = baseline at y, 1 = ascender at y.

caption.hjust

Horizontal justification for caption. Default = 0.5 (centered on x). 0 = flush-left at x, 1 = flush-right.

caption.fontface

The font face ("plain" (default), "bold", "italic", "bold.italic") for caption.

sub.text

The label with which the combined plot should be annotated. Can be a plotmath expression.

sub.color

Text color for annotation label (Default: "black").

sub.size

Point size of annotation text (Default: 12).

sub.x

The x position of annotation label (Default: 0.5).

sub.y

The y position of annotation label (Default: 0.5).

sub.hjust

Horizontal justification for annotation label (Default: 0.5).

sub.vjust

Vertical justification for annotation label (Default: 0.5).

sub.vpadding

Vertical padding. The total vertical space added to the label, given in grid units. By default, this is added equally above and below the label. However, by changing the y and vjust parameters, this can be changed (Default: grid::unit(1, "lines")).

sub.fontface

The font face ("plain" (default), "bold", "italic", "bold.italic") for the annotation label.

sub.angle

Angle at which annotation label is to be drawn (Default: 0).

sub.lineheight

Line height of annotation label.

title.caption.rel.heights

Numerical vector of relative columns heights while combining (title, plot, caption).

title.rel.heights

Numerical vector of relative columns heights while combining (title, plot).

caption.rel.heights

Numerical vector of relative columns heights while combining (plot, caption).

References

https://cran.r-project.org/package=ggstatsplot/vignettes/gghistostats.html

See Also

gghistostats

Examples

Run this code
# NOT RUN {
ggstatsplot::grouped_gghistostats(
  data = iris,
  x = Sepal.Length,
  test.value = 5,
  bf.message = TRUE,
  grouping.var = Species,
  bar.fill = "orange",
  nrow = 1,
  messages = FALSE
)
# }

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