Helper function for ggstatsplot::ggdotplotstats
to apply this function
across multiple levels of a given factor and combining the resulting plots
using ggstatsplot::combine_plots
.
grouped_ggdotplotstats(
data,
x,
y,
grouping.var,
output = "plot",
plotgrid.args = list(),
annotation.args = list(),
...
)
A dataframe (or a tibble) from which variables specified are to be taken. Other data types (e.g., matrix,table, array, etc.) will not be accepted.
A numeric variable from the dataframe data
.
Label or grouping variable.
A single grouping variable (can be entered either as a
bare name x
or as a string "x"
).
Character that describes what is to be returned: can be
"plot"
(default) or "subtitle"
or "caption"
. Setting this to
"subtitle"
will return the expression containing statistical results. If
you have set results.subtitle = FALSE
, then this will return a NULL
.
Setting this to "caption"
will return the expression containing details
about Bayes Factor analysis, but valid only when type = "parametric"
and
bf.message = TRUE
, otherwise this will return a NULL
.
A list
of additional arguments passed to
patchwork::wrap_plots
, except for guides
argument which is already
separately specified here.
A list
of additional arguments passed to
patchwork::plot_annotation
.
Arguments passed on to ggdotplotstats
point.args
A list of additional aesthetic arguments passed to
geom_point
.
type
A character specifying the type of statistical approach. Four possible options:
"parametric"
"nonparametric"
"robust"
"bayes"
Corresponding abbreviations are also accepted: "p"
(for parametric),
"np"
(for nonparametric), "r"
(for robust), or "bf"
(for Bayesian).
tr
Trim level for the mean when carrying out robust
tests. In case
of an error, try reducing the value of tr
, which is by default set to
0.2
. Lowering the value might help.
k
Number of digits after decimal point (should be an integer)
(Default: k = 2L
).
centrality.line.args
A list of additional aesthetic arguments to be
passed to the geom_line
used to display the lines corresponding to the
centrality parameter.
xlab
Labels for x
and y
axis variables. If NULL
(default),
variable names for x
and y
will be used.
subtitle
The text for the plot subtitle. Will work only if
results.subtitle = FALSE
.
caption
The text for the plot caption.
test.value
A number indicating the true value of the mean (Default:
0
).
bf.prior
A number between 0.5
and 2
(default 0.707
), the prior
width to use in calculating Bayes factors and posterior estimates.
bf.message
Logical that decides whether to display Bayes Factor in
favor of the null hypothesis. This argument is relevant only for
parametric test (Default: TRUE
).
effsize.type
Type of effect size needed for parametric tests. The
argument can be "d"
(for Cohen's d) or "g"
(for Hedge's g).
conf.level
Confidence/Credible Interval (CI) level. Default to 0.95
(95%
).
nboot
Number of bootstrap samples for computing confidence interval
for the effect size (Default: 100
).
results.subtitle
Decides whether the results of statistical tests are
to be displayed as a subtitle (Default: TRUE
). If set to FALSE
, only
the plot will be returned.
centrality.plotting
Logical that decides whether centrality tendency
measure is to be displayed as a point with a label (Default: TRUE
).
Function decides which central tendency measure to show depending on the
type
argument.
mean for parametric statistics
median for non-parametric statistics
trimmed mean for robust statistics
MAP estimator for Bayesian statistics
If you want default centrality parameter, you can specify this using
centrality.type
argument.
centrality.type
Decides which centrality parameter is to be displayed.
The default is to choose the same as type
argument. You can specify this
to be:
"parameteric"
(for mean)
"nonparametric"
(for median)
robust
(for trimmed mean)
bayes
(for MAP estimator)
Just as type
argument, abbreviations are also accepted.
ggplot.component
A ggplot
component to be added to the plot prepared
by ggstatsplot
. This argument is primarily helpful for grouped_
variants of all primary functions. Default is NULL
. The argument should
be entered as a ggplot2
function or a list of ggplot2
functions.
ggtheme
A function, ggplot2
theme name. Default value is
ggplot2::theme_bw()
. Any of the ggplot2
themes, or themes from
extension packages are allowed (e.g., ggthemes::theme_fivethirtyeight()
,
hrbrthemes::theme_ipsum_ps()
, etc.).
ggstatsplot.layer
Logical that decides whether theme_ggstatsplot
theme elements are to be displayed along with the selected ggtheme
(Default: TRUE
). theme_ggstatsplot
is an opinionated theme layer that
override some aspects of the selected ggtheme
.
ylab
Labels for x
- and y
- axis variables, respectively
(Defaults: "regression coefficient"
and "term"
).
https://indrajeetpatil.github.io/ggstatsplot/articles/web_only/ggdotplotstats.html
# NOT RUN {
# for reproducibility
set.seed(123)
library(ggstatsplot)
# removing factor level with very few no. of observations
df <- dplyr::filter(.data = ggplot2::mpg, cyl %in% c("4", "6", "8"))
# plot
grouped_ggdotplotstats(
data = df,
x = cty,
y = manufacturer,
grouping.var = cyl,
test.value = 15.5
)
# }
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