geom_confidence_tern: Confidence Interval

Description

Calculates the confidence intervals, via the Mahalnobis Distance and use of the Log-Ratio Transformation

Usage

geom_confidence_tern(mapping = NULL, data = NULL, stat = "ConfidenceTern",
  position = "identity", ..., lineend = "butt", linejoin = "round",
  linemitre = 1, na.rm = FALSE, show.legend = NA, inherit.aes = TRUE)
stat_confidence_tern(mapping = NULL, data = NULL, geom = "ConfidenceTern",
  position = "identity", ..., contour = TRUE, n = 100, h = NULL,
  na.rm = FALSE, breaks = c(0.5, 0.9, 0.95), show.legend = NA,
  inherit.aes = TRUE)

Arguments

mapping

Set of aesthetic mappings created by aes or aes_. If specified and inherit.aes = TRUE (the default), it is combined with the default mapping at the top

data

The data to be displayed in this layer. There are three options:

If NULL, the default, the data is inherited from the plot data as specified in the call to ggplot.

A data.fra

stat

The statistical transformation to use on the data for this layer, as a string.

position

Position adjustment, either as a string, or the result of a call to a position adjustment function.

...

other arguments passed on to layer. These are often aesthetics, used to set an aesthetic to a fixed value, like color = "red" or size = 3. They may also be parameters to the paired g

lineend

Line end style (round, butt, square)

linejoin

Line join style (round, mitre, bevel)

linemitre

Line mitre limit (number greater than 1)

na.rm

If FALSE (the default), removes missing values with a warning. If TRUE silently removes missing values.

show.legend

logical. Should this layer be included in the legends? NA, the default, includes if any aesthetics are mapped. FALSE never includes, and TRUE always includes.

inherit.aes

If FALSE, overrides the default aesthetics, rather than combining with them. This is most useful for helper functions that define both data and aesthetics and shouldn't inherit behaviour from the default plot specification, e.g.

geom

Use to override the default connection between geom_smooth and stat_smooth.

contour

If TRUE, contour the results of the 2d density estimation

number of grid points in each direction

Bandwidth (vector of length two). If NULL, estimated using bandwidth.nrd.

breaks

the confidence intervals, default to 50, 90 and 95 percent.