beast-class

get.tree,beast-method


Class "beast"
This class stores information of beast output


classes

ggtree extends the ggplot2 plotting system which implemented the
grammar of graphics. ggtree is designed for visualizing phylogenetic tree
and different types of associated annotation data.

Guangchuang Yu

ggtree

a phylogenetic tree viewer for different types of tree annotations

beast-class function

 <dl>
<dt><code>fields</code></dt><dd>beast statistic variables</dd> <dt><code>treetext</code></dt><dd>tree text in beast file</dd> <dt><code>phylo</code></dt><dd>tree phylo object</dd> <dt><code>translation</code></dt><dd>tip number to name translation in beast file</dd> <dt><code>stats</code></dt><dd>beast statistics</dd> <dt><code>file</code></dt><dd>beast file, nexus format</dd> <dt><code>extraInfo</code></dt><dd>extra information</dd> </dl>

beast-class: Class "beast" This class stores information of beast output

Description

Arguments

Slots

See Also