codeml_mlc-class


Class "codeml_mlc"
This class stores information of mlc file frm codeml output


classes

ggtree extends the ggplot2 plotting system which implemented the
grammar of graphics. ggtree is designed for visualizing phylogenetic tree
and different types of associated annotation data.

Guangchuang Yu

ggtree

a phylogenetic tree viewer for different types of tree annotations

codeml_mlc-class function

 <dl>
<dt><code>fields</code></dt><dd>available features</dd> <dt><code>treetext</code></dt><dd>tree text</dd> <dt><code>phylo</code></dt><dd>phylo object</dd> <dt><code>dNdS</code></dt><dd>dN dS information</dd> <dt><code>mlcfile</code></dt><dd>mlc file</dd> <dt><code>extraInfo</code></dt><dd>extra information</dd> </dl>

codeml_mlc-class: Class "codeml_mlc" This class stores information of mlc file frm codeml output

Description

Arguments

Slots

See Also