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ggtree (version 1.4.11)

msaplot: msaplot

Description

multiple sequence alignment with phylogenetic tree

Usage

msaplot(p, fasta, offset = 0, width = 1, color = NULL, window = NULL)

Arguments

p
tree view
fasta
fasta file, multiple sequence alignment
offset
offset of MSA to tree
width
total width of alignment, compare to width of tree
color
color
window
specific a slice to display

Value

tree view