phyPML

tree in pml object, output of phangorn::optim.pml

pmlTree

one of 'ml' and 'bayes' for inferring ancestral sequences

type


tree annotation of sequence substitution by comparing to parent node


ggtree extends the ggplot2 plotting system which implemented the
grammar of graphics. ggtree is designed for visualizing phylogenetic tree
and different types of associated annotation data.

phyPML: treeAnno.pml

Description

Usage

Arguments

Value