ecoCoefs

optima.gllvm

optima

tolerances

tolerances.gllvm

Extracts species optima and tolerances, potentially with standard errors (derived with the Delta method).

Analysis of multivariate data using generalized linear latent variable models (gllvm).
Estimation is performed using either the Laplace method, variational approximations, or extended variational approximations, implemented via TMB (Kristensen et al. (2016), <doi:10.18637/jss.v070.i05>).

Jenni Niku

gllvm

Generalized Linear Latent Variable Models

Wesley Brooks

Riki Herliansyah

Francis K.C. Hui

Pekka Korhonen

Sara Taskinen

Bert van der Veen

David I. Warton

ecoCoefs function

<dl><dt>object</dt>
<dd>an object of class 'gllvm'.</dd>
<dt>sd.errors</dt>
<dd>logical. If <code>TRUE</code>, also returns standard errors.</dd>
<dt>...</dt>
<dd>Not used.</dd></dl>

Arguments

Author

Functions to extract ecological quantities of the latent variables from a GLLVM, if species are a quadratic function of the latent variables. — ecoCoefs

<dl>

<dt>object</dt>
<dd>an object of class 'gllvm'.</dd>


<dt>sd.errors</dt>
<dd>logical. If <code>TRUE</code>, also returns standard errors.</dd>


<dt>...</dt>
<dd>Not used.</dd>

</dl>

Functions to extract ecological quantities of the latent variables from a GLLVM, if species are a quadratic function of the latent variables.

ecoCoefs: Functions to extract ecological quantities of the latent variables from a GLLVM, if species are a quadratic function of the latent variables.

Description

Usage

Arguments

Author

Details