colorize_iupac_string

Apply Colors to IUPAC String (Monosaccharides + Gray Linkages)

internal

Computational representations of glycan compositions and structures,
including details such as linkages, anomers, and substituents. Supports varying
levels of monosaccharide specificity (e.g., "Hex" or "Gal") and ambiguous linkages.
Provides robust parsing and generation of IUPAC-condensed structure strings.
Optimized for vectorized operations on glycan structures, with efficient handling
of duplications. As the cornerstone of the glycoverse ecosystem, this package
delivers the foundational data structures that power glycomics and glycoproteomics
analysis workflows.

Bin Fu

glyrepr

Representation for Glycan Compositions and Structures

colorize_iupac_string function

<dl><dt>iupac_text</dt>
<dd>Character string of IUPAC notation</dd>
<dt>mono_names</dt>
<dd>Character vector of monosaccharide names to color</dd></dl>

Arguments

Apply Colors to IUPAC String (Monosaccharides + Gray Linkages) — colorize_iupac_string

<dl>

<dt>iupac_text</dt>
<dd>Character string of IUPAC notation</dd>


<dt>mono_names</dt>
<dd>Character vector of monosaccharide names to color</dd>

</dl>

colorize_iupac_string: Apply Colors to IUPAC String (Monosaccharides + Gray Linkages)

Description

Usage

Value

Arguments