get_structure_graphs

Extract individual glycan structure graphs from a glycan structure vector.

Computational representations of glycan compositions and structures,
including details such as linkages, anomers, and substituents. Supports varying
levels of monosaccharide specificity (e.g., "Hex" or "Gal") and ambiguous linkages.
Provides robust parsing and generation of IUPAC-condensed structure strings.
Optimized for vectorized operations on glycan structures, with efficient handling
of duplications. As the cornerstone of the glycoverse ecosystem, this package
delivers the foundational data structures that power glycomics and glycoproteomics
analysis workflows.

Bin Fu

glyrepr

Representation for Glycan Compositions and Structures

get_structure_graphs function

<dl><dt>x</dt>
<dd>A glycan structure vector.</dd>
<dt>return_list</dt>
<dd>If <code>TRUE</code>, always returns a list.
If <code>FALSE</code> and <code>x</code> has a length of 1, return the igraph object directly.
If not provided (default), <code>FALSE</code> when <code>x</code> has a length of 1 and <code>TRUE</code> otherwise.</dd></dl>

Arguments

Access Individual Glycan Structures — get_structure_graphs

<dl>

<dt>x</dt>
<dd>A glycan structure vector.</dd>


<dt>return_list</dt>
<dd>If <code>TRUE</code>, always returns a list.
If <code>FALSE</code> and <code>x</code> has a length of 1, return the igraph object directly.
If not provided (default), <code>FALSE</code> when <code>x</code> has a length of 1 and <code>TRUE</code> otherwise.</dd>

</dl>

get_structure_graphs: Access Individual Glycan Structures

Description

Usage

Value

Arguments

Examples