A data set containing BP, MF and CC GO-terms as an edgelist for Rat

datasets

Contains the Gene ontology terms and skeleton for the reduced GO directed acyclic graph (DAG) for the organisms
Rat and Mouse. The methods are explicitly discussed in the following article : Manjang et al (2020) <doi:10.1038/s41598-020-73326-3>.

Kalifa Manjang

gontr

Dataset for 'GOxploreR'

Rat function

A list containing 3 objects:<dl class="dl-horizontal">
 <dt>BPlist</dt><dd>BP GO-terms edgelist.</dd>
 <dt>MFlist</dt><dd>MF GO-terms edgelist.</dd>
 <dt>CClist</dt><dd>CC GO-terms edgelist.</dd>
</dl>

Format

BP GO-terms as an Edgelist for Rat — Rat

A list containing 3 objects:<dl class='dl-horizontal'>
 <dt>BPlist</dt><dd>BP GO-terms edgelist.</dd>
 <dt>MFlist</dt><dd>MF GO-terms edgelist.</dd>
 <dt>CClist</dt><dd>CC GO-terms edgelist.</dd>
</dl>

Rat: BP GO-terms as an Edgelist for Rat

Description

Usage

Arguments

Format