gphmm (version 0.99.0)

computeCounts: Compute counts for emissions and transitions.

Description

computeCounts returns a list with emission and transition counts.

Usage

computeCounts(gphmm)

Arguments

gphmm

- output of computegphmm with arg output='long'.

Examples

# NOT RUN {
gphmmOut <- computegphmm('ATCG', 'ATG', output = 'long')
computeCounts(gphmmOut)
# }